Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pqq-like domain-containing protein | SAMN05444680_111107 | Not Available | Negative | 4926295 - 4926969 | 24178.0 |
| hypothetical protein | SAMN05444680_111108 | Not Available | Negative | 4927015 - 4928235 | 42694.0 |
| integrase/recombinase xerd | SAMN05444680_111109 | Not Available | Positive | 4928921 - 4929823 | 33976.2 |
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN05444680_111110 | Not Available | Positive | 4929850 - 4930824 | 33636.6 |
| nadph:quinone reductase | SAMN05444680_111111 | Not Available | Negative | 4931157 - 4932572 | 51261.4 |
| uncharacterized conserved protein, contains ferritin-like duf455 domain | SAMN05444680_111112 | Not Available | Negative | 4932816 - 4933619 | 29879.8 |
| carbonic anhydrase or acetyltransferase, isoleucine patch superfamily | SAMN05444680_111113 | Not Available | Positive | 4933659 - 4934183 | 18298.9 |
| molecular chaperone hsp33 | SAMN05444680_111114 | Not Available | Positive | 4934184 - 4935182 | 36300.7 |
| hypothetical protein | SAMN05444680_111115 | Not Available | Negative | 4935194 - 4936177 | 35791.6 |
| nicotinamide riboside kinase | SAMN05444680_111116 | Not Available | Negative | 4936203 - 4936823 | 21835.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
