Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05444680_11197 | Not Available | Negative | 4918037 - 4918750 | 26408.3 |
| hypothetical protein | SAMN05444680_11198 | Not Available | Positive | 4918886 - 4919386 | 18311.8 |
| n-acetylmuramoyl-l-alanine amidase | SAMN05444680_11199 | Not Available | Negative | 4919395 - 4920873 | 52079.3 |
| trna threonylcarbamoyladenosine biosynthesis protein tsae | SAMN05444680_111100 | Not Available | Negative | 4920870 - 4921364 | 17970.2 |
| epoxyqueuosine reductase | SAMN05444680_111101 | Not Available | Positive | 4921371 - 4922420 | 38394.1 |
| hypothetical protein | SAMN05444680_111102 | Not Available | Negative | 4922407 - 4922874 | 16269.3 |
| hypothetical protein | SAMN05444680_111103 | Not Available | Negative | 4922877 - 4923785 | 31894.9 |
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN05444680_111104 | Not Available | Positive | 4923898 - 4924872 | 34356.6 |
| hypothetical protein | SAMN05444680_111105 | Not Available | Negative | 4924811 - 4925452 | 21613.8 |
| predicted dithiol-disulfide oxidoreductase, duf899 family | SAMN05444680_111106 | Not Available | Negative | 4925484 - 4926266 | 29374.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
