Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05444680_11187 | Not Available | Negative | 4910367 - 4911323 | 35254.8 |
| ornithine cyclodeaminase | SAMN05444680_11188 | Not Available | Negative | 4911357 - 4912406 | 38422.2 |
| transcriptional regulator, asnc family | SAMN05444680_11189 | Not Available | Positive | 4912548 - 4912970 | 15592.8 |
| zinc/manganese transport system permease protein | SAMN05444680_11190 | Not Available | Negative | 4912958 - 4913731 | 26616.4 |
| zinc/manganese transport system substrate-binding protein | SAMN05444680_11191 | Not Available | Negative | 4913728 - 4914651 | 32574.2 |
| phosphate-selective porin o and p | SAMN05444680_11192 | Not Available | Negative | 4914686 - 4916098 | 50091.3 |
| hypothetical protein | SAMN05444680_11193 | Not Available | Negative | 4916174 - 4916467 | 9956.07 |
| hypothetical protein | SAMN05444680_11194 | Not Available | Negative | 4916569 - 4917027 | 16721.9 |
| cytochrome c | SAMN05444680_11195 | Not Available | Negative | 4917056 - 4917442 | 13416.0 |
| rubrerythrin | SAMN05444680_11196 | Not Available | Negative | 4917439 - 4918008 | 19785.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
