Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized conserved protein | SAMN05444680_11177 | Not Available | Negative | 4900805 - 4901161 | 13079.5 |
| hypothetical protein | SAMN05444680_11178 | Not Available | Negative | 4901280 - 4902221 | 32328.4 |
| threonine dehydratase | SAMN05444680_11179 | Not Available | Positive | 4902296 - 4903267 | 34316.2 |
| putative abc transport system atp-binding protein | SAMN05444680_11180 | Not Available | Negative | 4903264 - 4903917 | 23066.8 |
| trna dimethylallyltransferase | SAMN05444680_11181 | Not Available | Negative | 4903914 - 4904867 | 34142.9 |
| mfs transporter, dha1 family, bicyclomycin/chloramphenicol resistance protein | SAMN05444680_11182 | Not Available | Negative | 4904857 - 4906047 | 41472.8 |
| hypothetical protein | SAMN05444680_11183 | Not Available | Negative | 4906136 - 4907062 | 33719.0 |
| dna mismatch repair protein mutl | SAMN05444680_11184 | Not Available | Negative | 4907243 - 4909111 | 66908.7 |
| membrane-associated protein | SAMN05444680_11185 | Not Available | Positive | 4909161 - 4909811 | 23921.7 |
| osmotically inducible lipoprotein osmb | SAMN05444680_11186 | Not Available | Negative | 4909958 - 4910239 | 9275.85 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
