Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amino acid/amide abc transporter membrane protein 2, haat family | SAMN05444680_11167 | Not Available | Positive | 4888922 - 4889911 | 34931.0 |
| methyl-accepting chemotaxis protein | SAMN05444680_11168 | Not Available | Positive | 4890076 - 4891497 | 49486.2 |
| hypothetical protein | SAMN05444680_11169 | Not Available | Negative | 4891498 - 4892139 | 23828.0 |
| carbonic anhydrase | SAMN05444680_11170 | Not Available | Negative | 4892171 - 4892809 | 23230.8 |
| hypothetical protein | SAMN05444680_11171 | Not Available | Positive | 4893047 - 4894417 | 46586.7 |
| outer membrane protein | SAMN05444680_11172 | Not Available | Positive | 4894520 - 4895341 | 29364.7 |
| predicted secreted hydrolase | SAMN05444680_11173 | Not Available | Negative | 4895384 - 4896466 | 40766.2 |
| putative abc transport system permease protein | SAMN05444680_11174 | Not Available | Negative | 4896474 - 4899038 | 89313.3 |
| hypothetical protein | SAMN05444680_11175 | Not Available | Positive | 4899203 - 4899547 | 13093.2 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05444680_11176 | Not Available | Negative | 4899555 - 4900808 | 44746.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
