Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nitrate/nitrite transport system substrate-binding protein | SAMN05444680_11127 | Not Available | Negative | 4847764 - 4849008 | 45274.5 |
| antar domain-containing protein | SAMN05444680_11128 | Not Available | Negative | 4849337 - 4850602 | 46127.4 |
| n6-l-threonylcarbamoyladenine synthase | SAMN05444680_11129 | Not Available | Positive | 4850679 - 4851728 | 36332.9 |
| hypothetical protein | SAMN05444680_11130 | Not Available | Negative | 4851676 - 4852416 | 27319.8 |
| molecular chaperone ibpa, hsp20 family | SAMN05444680_11131 | Not Available | Negative | 4852653 - 4853024 | 13595.2 |
| amino acid/amide abc transporter substrate-binding protein, haat family | SAMN05444680_11132 | Not Available | Positive | 4853132 - 4854427 | 47431.1 |
| aspartate/methionine/tyrosine aminotransferase | SAMN05444680_11133 | Not Available | Positive | 4854448 - 4855605 | 41853.4 |
| ssu ribosomal protein s15p | SAMN05444680_11134 | Not Available | Positive | 4855797 - 4856063 | 9876.12 |
| polyribonucleotide nucleotidyltransferase | SAMN05444680_11135 | Not Available | Positive | 4856285 - 4858555 | 82172.8 |
| nadph2:quinone reductase | SAMN05444680_11136 | Not Available | Positive | 4858643 - 4859641 | 34530.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
