Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutamate dehydrogenase (nad(p)+) | SAMN05444680_101411 | Not Available | Negative | 428966 - 430192 | 44247.5 |
| putative abc transport system atp-binding protein | SAMN05444680_101412 | Not Available | Negative | 430218 - 431012 | 29053.5 |
| putative abc transport system permease protein | SAMN05444680_101413 | Not Available | Negative | 431012 - 431941 | 32016.5 |
| putative abc transport system substrate-binding protein | SAMN05444680_101414 | Not Available | Negative | 432077 - 433054 | 33451.2 |
| transcriptional regulator, asnc family | SAMN05444680_101415 | Not Available | Positive | 433261 - 433734 | 17767.6 |
| hypothetical protein | SAMN05444680_101416 | Not Available | Negative | 433742 - 434383 | 22838.0 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05444680_101417 | Not Available | Negative | 434383 - 434952 | 21116.4 |
| uncharacterized membrane protein | SAMN05444680_101418 | Not Available | Positive | 435107 - 435397 | 9811.99 |
| hypothetical protein | SAMN05444680_101419 | Not Available | Positive | 435419 - 436267 | 31504.3 |
| putative dna-binding domain-containing protein | SAMN05444680_101420 | Not Available | Positive | 436264 - 437058 | 28194.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
