Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uroporphyrin-iii c-methyltransferase | SAMN05444680_11117 | Not Available | Negative | 4833953 - 4834741 | 27227.8 |
| anthranilate phosphoribosyltransferase | SAMN05444680_11118 | Not Available | Negative | 4834738 - 4835676 | 33361.4 |
| assimilatory nitrate reductase (nadh) alpha subunit apoprotein | SAMN05444680_11119 | Not Available | Negative | 4835775 - 4838576 | 99983.2 |
| assimilatory nitrite reductase (nad(p)h) small subunit | SAMN05444680_11120 | Not Available | Negative | 4838587 - 4838967 | 13547.2 |
| assimilatory nitrite reductase (nad(p)h) large subunit precursor | SAMN05444680_11121 | Not Available | Negative | 4838979 - 4841435 | 90057.3 |
| serine/threonine protein phosphatase prpc | SAMN05444680_11122 | Not Available | Positive | 4841498 - 4843207 | 61700.4 |
| mfs transporter, nnp family, nitrate/nitrite transporter | SAMN05444680_11123 | Not Available | Negative | 4843237 - 4844508 | 44576.7 |
| type iv pili methyl-accepting chemotaxis transducer n-term | SAMN05444680_11124 | Not Available | Positive | 4844734 - 4846020 | 45982.4 |
| nitrate/nitrite transport system atp-binding protein | SAMN05444680_11125 | Not Available | Negative | 4846036 - 4846842 | 29254.7 |
| nitrate/nitrite transport system permease protein | SAMN05444680_11126 | Not Available | Negative | 4846839 - 4847753 | 32968.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
