Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribosome-associated protein | SAMN05444680_1117 | Not Available | Negative | 4826810 - 4827466 | 24385.8 |
| microcin-processing peptidase 1. unknown type peptidase. merops family u62 | SAMN05444680_1118 | Not Available | Positive | 4827544 - 4828914 | 48548.0 |
| biotin transport system atp-binding protein | SAMN05444680_1119 | Not Available | Positive | 4828917 - 4829672 | 27312.5 |
| biotin transport system permease protein | SAMN05444680_11110 | Not Available | Positive | 4829665 - 4830258 | 21281.8 |
| biotin transport system substrate-specific component | SAMN05444680_11111 | Not Available | Positive | 4830292 - 4830888 | 20342.1 |
| hypothetical protein | SAMN05444680_11112 | Not Available | Negative | 4830911 - 4831363 | 17058.1 |
| adp-ribose pyrophosphatase yjhb, nudix family | SAMN05444680_11113 | Not Available | Negative | 4831354 - 4831827 | 17697.0 |
| hypothetical protein | SAMN05444680_11114 | Not Available | Negative | 4831824 - 4832279 | 16103.8 |
| ssu ribosomal protein s21p | SAMN05444680_11115 | Not Available | Negative | 4832395 - 4832607 | 8506.61 |
| hypothetical protein | SAMN05444680_11116 | Not Available | Negative | 4832703 - 4833953 | 44757.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
