Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amino acid abc transporter substrate-binding protein, paat family | SAMN05444680_110191 | Not Available | Positive | 4819143 - 4819958 | 28912.1 |
| metallo-beta-lactamase superfamily protein | SAMN05444680_110192 | Not Available | Positive | 4820000 - 4820455 | 15851.2 |
| helix-turn-helix | SAMN05444680_110193 | Not Available | Positive | 4820789 - 4821100 | 11236.6 |
| transposase, is5 family | SAMN05444680_110194 | Not Available | Negative | 4821268 - 4821362 | 3097.8 |
| uronate dehydrogenase | SAMN05444680_1111 | Not Available | Negative | 4821363 - 4821619 | 8968.89 |
| transcriptional regulator, gntr family | SAMN05444680_1112 | Not Available | Positive | 4821859 - 4822521 | 23750.1 |
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN05444680_1113 | Not Available | Positive | 4822635 - 4823609 | 34394.8 |
| 5-dehydro-4-deoxyglucarate dehydratase | SAMN05444680_1114 | Not Available | Positive | 4823761 - 4824672 | 32563.2 |
| aldehyde dehydrogenase (nad+) | SAMN05444680_1115 | Not Available | Positive | 4824764 - 4826200 | 50358.2 |
| molybdopterin adenylyltransferase | SAMN05444680_1116 | Not Available | Negative | 4826217 - 4826813 | 21103.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
