Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome b561 | SAMN05444680_110181 | Not Available | Negative | 4809775 - 4810362 | 21554.6 |
| hypothetical protein | SAMN05444680_110182 | Not Available | Negative | 4810340 - 4810843 | 18012.5 |
| predicted dithiol-disulfide oxidoreductase, duf899 family | SAMN05444680_110183 | Not Available | Positive | 4810896 - 4811660 | 29290.2 |
| adenylate cyclase | SAMN05444680_110184 | Not Available | Negative | 4811648 - 4812418 | 28257.3 |
| alkylhydroperoxidase family enzyme, contains cxxc motif | SAMN05444680_110185 | Not Available | Negative | 4812418 - 4813497 | 39044.5 |
| dna-binding transcriptional regulator, lysr family | SAMN05444680_110186 | Not Available | Negative | 4813606 - 4814520 | 33372.6 |
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN05444680_110187 | Not Available | Positive | 4814625 - 4815593 | 34129.2 |
| 2-methylcitrate dehydratase prpd | SAMN05444680_110188 | Not Available | Positive | 4815646 - 4817016 | 48487.8 |
| 3-isopropylmalate dehydrogenase | SAMN05444680_110189 | Not Available | Positive | 4817042 - 4818121 | 38789.5 |
| nadph:quinone reductase | SAMN05444680_110190 | Not Available | Positive | 4818130 - 4819146 | 35265.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
