Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding transcriptional regulator, lysr family | SAMN05444680_110171 | Not Available | Negative | 4802253 - 4803137 | 32036.0 |
| hippurate hydrolase | SAMN05444680_110172 | Not Available | Positive | 4803262 - 4804578 | 46484.0 |
| lysr substrate binding domain-containing protein | SAMN05444680_110173 | Not Available | Negative | 4804619 - 4805236 | 22063.8 |
| n-acetyl-gamma-glutamyl-phosphate reductase | SAMN05444680_110174 | Not Available | Positive | 4805326 - 4805622 | 10314.3 |
| cytochrome c556 | SAMN05444680_110175 | Not Available | Positive | 4805753 - 4806199 | 15708.0 |
| cupin domain-containing protein | SAMN05444680_110176 | Not Available | Negative | 4806256 - 4806540 | 9882.92 |
| tigr03118 family protein | SAMN05444680_110177 | Not Available | Negative | 4806657 - 4807787 | 37857.5 |
| ribosome association toxin past (rata) of the ratab toxin-antitoxin module | SAMN05444680_110178 | Not Available | Negative | 4807921 - 4808490 | 21186.7 |
| ycei-like domain-containing protein | SAMN05444680_110179 | Not Available | Negative | 4808487 - 4809215 | 25633.1 |
| polyisoprenoid-binding protein ycei | SAMN05444680_110180 | Not Available | Negative | 4809212 - 4809796 | 20963.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
