Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative cardiolipin synthase | SAMN05444680_110151 | Not Available | Negative | 4781343 - 4782905 | 55918.9 |
| polyphosphate kinase 2, pa0141 family | SAMN05444680_110152 | Not Available | Negative | 4782923 - 4783795 | 33396.1 |
| protein of unknown function | SAMN05444680_110153 | Not Available | Negative | 4783819 - 4784712 | 32213.0 |
| protein of unknown function | SAMN05444680_110154 | Not Available | Negative | 4784751 - 4786268 | 52024.2 |
| putative transposase | SAMN05444680_110155 | Not Available | Positive | 4786587 - 4786802 | 8339.76 |
| uncharacterized conserved protein ygbk, duf1537 family | SAMN05444680_110156 | Not Available | Negative | 4786896 - 4788188 | 44810.0 |
| ribulose-bisphosphate carboxylase large chain | SAMN05444680_110157 | Not Available | Negative | 4788185 - 4789450 | 44912.6 |
| glyoxalase/bleomycin resistance protein/dioxygenase superfamily protein | SAMN05444680_110158 | Not Available | Negative | 4789447 - 4790001 | 20996.7 |
| trap transporter, dctm subunit | SAMN05444680_110159 | Not Available | Negative | 4790057 - 4791937 | 65208.2 |
| tripartite atp-independent transporter solute receptor, dctp family | SAMN05444680_110160 | Not Available | Negative | 4791957 - 4792988 | 37221.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
