Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aryl-phospho-beta-d-glucosidase bglc, gh1 family | SAMN05444680_110141 | Not Available | Negative | 4766908 - 4768386 | 56870.0 |
| carbohydrate abc transporter atp-binding protein, cut1 family | SAMN05444680_110142 | Not Available | Negative | 4768405 - 4769466 | 38346.7 |
| carbohydrate abc transporter membrane protein 2, cut1 family | SAMN05444680_110143 | Not Available | Negative | 4769640 - 4770452 | 30098.6 |
| carbohydrate abc transporter membrane protein 1, cut1 family | SAMN05444680_110144 | Not Available | Negative | 4770484 - 4771431 | 35037.4 |
| carbohydrate abc transporter substrate-binding protein, cut1 family | SAMN05444680_110145 | Not Available | Negative | 4771474 - 4772751 | 45706.5 |
| sugar kinase of the nbd/hsp70 family, may contain an n-terminal hth domain | SAMN05444680_110146 | Not Available | Positive | 4772898 - 4774220 | 46138.8 |
| d-3-phosphoglycerate dehydrogenase | SAMN05444680_110147 | Not Available | Negative | 4774234 - 4775430 | 41631.4 |
| phosphoserine aminotransferase apoenzyme | SAMN05444680_110148 | Not Available | Negative | 4775423 - 4776505 | 39936.7 |
| outer membrane autotransporter barrel domain-containing protein | SAMN05444680_110149 | Not Available | Positive | 4776697 - 4779636 | 100792.0 |
| high affinity sulphate transporter 1 | SAMN05444680_110150 | Not Available | Negative | 4779643 - 4781403 | 61872.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
