Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05444680_110121 | Not Available | Positive | 4740585 - 4742456 | 68304.7 |
| adenylate and guanylate cyclase catalytic domain-containing protein | SAMN05444680_110122 | Not Available | Negative | 4742411 - 4745707 | 118430.0 |
| uncharacterized conserved protein | SAMN05444680_110123 | Not Available | Positive | 4745906 - 4747000 | 40276.9 |
| aspartate ammonia-lyase | SAMN05444680_110124 | Not Available | Negative | 4747020 - 4748441 | 51022.3 |
| predicted arabinose efflux permease, mfs family | SAMN05444680_110125 | Not Available | Negative | 4748541 - 4750148 | 56640.2 |
| dihydrofolate reductase | SAMN05444680_110126 | Not Available | Negative | 4750228 - 4750878 | 23645.3 |
| imidazolonepropionase | SAMN05444680_110127 | Not Available | Positive | 4750996 - 4752450 | 51617.3 |
| protein of unknown function | SAMN05444680_110128 | Not Available | Negative | 4752457 - 4753092 | 22884.9 |
| ompa family protein | SAMN05444680_110129 | Not Available | Negative | 4753085 - 4753732 | 23196.8 |
| protein of unknown function | SAMN05444680_110130 | Not Available | Negative | 4753732 - 4755822 | 73704.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
