Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| predicted 3-hydroxylacyl-acp dehydratase, hotdog domain | SAMN05444680_101401 | Not Available | Negative | 418605 - 419060 | 16089.1 |
| methyltransferase domain-containing protein | SAMN05444680_101402 | Not Available | Negative | 419057 - 419806 | 27296.9 |
| peptidoglycan/xylan/chitin deacetylase, pgda/cda1 family | SAMN05444680_101403 | Not Available | Negative | 419844 - 420707 | 30724.1 |
| predicted exporter | SAMN05444680_101404 | Not Available | Negative | 420707 - 423097 | 83407.7 |
| outer membrane lipoprotein-sorting protein | SAMN05444680_101405 | Not Available | Negative | 423094 - 423720 | 22732.5 |
| predicted acyltransferase, lplat superfamily | SAMN05444680_101406 | Not Available | Negative | 423692 - 424672 | 36556.0 |
| acyl-coenzyme a synthetase/amp-(fatty) acid ligase | SAMN05444680_101407 | Not Available | Negative | 424669 - 426372 | 60022.9 |
| uncharacterized membrane protein | SAMN05444680_101408 | Not Available | Negative | 426386 - 427009 | 22680.2 |
| acyl carrier protein | SAMN05444680_101409 | Not Available | Negative | 427028 - 427267 | 8555.13 |
| hypothetical protein | SAMN05444680_101410 | Not Available | Positive | 427444 - 428964 | 53980.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
