Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cbs domain-containing protein | SAMN05444680_110111 | Not Available | Positive | 4731443 - 4731880 | 15603.1 |
| predicted abc-type atpase | SAMN05444680_110112 | Not Available | Negative | 4732405 - 4733061 | 23330.2 |
| antitoxin phd_yefm, type ii toxin-antitoxin system | SAMN05444680_110113 | Not Available | Negative | 4733072 - 4733443 | 13081.7 |
| hypothetical protein | SAMN05444680_110114 | Not Available | Negative | 4733556 - 4733966 | 15016.1 |
| threonine/homoserine/homoserine lactone efflux protein | SAMN05444680_110115 | Not Available | Negative | 4734124 - 4734735 | 21657.1 |
| hypothetical protein | SAMN05444680_110116 | Not Available | Negative | 4734732 - 4735010 | 9647.91 |
| nad(p)-binding rossmann-like domain-containing protein | SAMN05444680_110117 | Not Available | Positive | 4735134 - 4737470 | 85526.1 |
| hypothetical protein | SAMN05444680_110118 | Not Available | Positive | 4737467 - 4738288 | 28856.1 |
| geranylgeranyl diphosphate synthase, type ii | SAMN05444680_110119 | Not Available | Positive | 4738305 - 4739354 | 39759.7 |
| uncharacterized conserved protein | SAMN05444680_110120 | Not Available | Positive | 4739371 - 4740579 | 44411.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
