Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| s-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase | SAMN05444680_11091 | Not Available | Positive | 4707800 - 4708912 | 39041.0 |
| cupin domain-containing protein | SAMN05444680_11092 | Not Available | Negative | 4708903 - 4709349 | 15586.6 |
| transcriptional regulator, lysr family | SAMN05444680_11093 | Not Available | Negative | 4709392 - 4710327 | 35039.1 |
| 2-polyprenyl-6-methoxyphenol hydroxylase | SAMN05444680_11094 | Not Available | Positive | 4710550 - 4711662 | 38873.2 |
| protein of unknown function | SAMN05444680_11095 | Not Available | Positive | 4711718 - 4713385 | 60111.4 |
| protein of unknown function | SAMN05444680_11096 | Not Available | Positive | 4713407 - 4714756 | 49668.7 |
| uncharacterized protein | SAMN05444680_11097 | Not Available | Positive | 4714768 - 4715811 | 36574.8 |
| hypothetical protein | SAMN05444680_11098 | Not Available | Positive | 4715808 - 4718207 | 86706.8 |
| ribonuclease bn, trna processing enzyme | SAMN05444680_11099 | Not Available | Positive | 4718204 - 4719136 | 33823.3 |
| prolyl oligopeptidase family protein | SAMN05444680_110100 | Not Available | Positive | 4719178 - 4720335 | 43449.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
