Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN05444680_11081 | Not Available | Positive | 4698050 - 4699024 | 33699.4 |
| lactate dehydrogenase | SAMN05444680_11082 | Not Available | Positive | 4699021 - 4699992 | 35343.5 |
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN05444680_11083 | Not Available | Negative | 4699989 - 4700957 | 33801.5 |
| transcriptional regulator, iclr family | SAMN05444680_11084 | Not Available | Positive | 4701065 - 4701823 | 27172.5 |
| gluconolactonase | SAMN05444680_11085 | Not Available | Negative | 4701845 - 4702759 | 33062.4 |
| predicted metal-dependent hydrolase, tim-barrel fold | SAMN05444680_11086 | Not Available | Negative | 4702774 - 4703580 | 29202.0 |
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN05444680_11087 | Not Available | Negative | 4703664 - 4704635 | 34026.1 |
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN05444680_11088 | Not Available | Negative | 4704674 - 4705672 | 34740.6 |
| d-3-phosphoglycerate dehydrogenase | SAMN05444680_11089 | Not Available | Negative | 4705747 - 4706661 | 31719.7 |
| regulator of rnase e activity rraa | SAMN05444680_11090 | Not Available | Negative | 4706658 - 4707344 | 23605.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
