Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-methylaconitate cis-trans isomerase | SAMN05444680_11071 | Not Available | Negative | 4685089 - 4686282 | 41878.3 |
| aconitate hydratase | SAMN05444680_11072 | Not Available | Negative | 4686279 - 4688912 | 95805.3 |
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN05444680_11073 | Not Available | Negative | 4688928 - 4689905 | 33981.3 |
| 2-methylcitrate synthase | SAMN05444680_11074 | Not Available | Negative | 4690025 - 4691173 | 42252.7 |
| hypothetical protein | SAMN05444680_11075 | Not Available | Positive | 4691306 - 4692718 | 52323.2 |
| transcriptional regulator, gntr family | SAMN05444680_11076 | Not Available | Negative | 4692740 - 4693447 | 25882.1 |
| dihydroxy-acid dehydratase | SAMN05444680_11077 | Not Available | Positive | 4693540 - 4695267 | 62540.3 |
| regulator of rnase e activity rraa | SAMN05444680_11078 | Not Available | Positive | 4695293 - 4696003 | 25571.7 |
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN05444680_11079 | Not Available | Positive | 4696042 - 4697025 | 34823.4 |
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN05444680_11080 | Not Available | Positive | 4697044 - 4698036 | 34430.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
