Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pimeloyl-acp methyl ester carboxylesterase | SAMN05444680_11061 | Not Available | Positive | 4674672 - 4675382 | 25851.4 |
| protocatechuate 4,5-dioxygenase beta subunit | SAMN05444680_11062 | Not Available | Negative | 4675390 - 4676238 | 30741.1 |
| protocatechuate 4,5-dioxygenase alpha subunit | SAMN05444680_11063 | Not Available | Negative | 4676265 - 4676606 | 12508.0 |
| dna-binding transcriptional regulator, lysr family | SAMN05444680_11064 | Not Available | Positive | 4676677 - 4677591 | 33479.7 |
| hypothetical protein | SAMN05444680_11065 | Not Available | Negative | 4677594 - 4677998 | 14927.5 |
| p-hydroxybenzoate 3-monooxygenase | SAMN05444680_11066 | Not Available | Negative | 4678026 - 4679495 | 53967.5 |
| methionine synthase (b12-independent) | SAMN05444680_11067 | Not Available | Negative | 4679535 - 4681853 | 85898.7 |
| transcriptional regulator, lysr family | SAMN05444680_11068 | Not Available | Positive | 4681952 - 4682842 | 33450.9 |
| 2-methylisocitrate lyase, pep mutase family | SAMN05444680_11069 | Not Available | Negative | 4682850 - 4683719 | 31319.6 |
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN05444680_11070 | Not Available | Negative | 4684039 - 4685010 | 33493.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
