Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator, lysr family | SAMN05444680_11051 | Not Available | Negative | 4665442 - 4666338 | 32319.6 |
| molybdate transport system substrate-binding protein | SAMN05444680_11052 | Not Available | Positive | 4666524 - 4667216 | 23743.5 |
| mfs transporter, aahs family, 4-hydroxybenzoate transporter | SAMN05444680_11053 | Not Available | Positive | 4667260 - 4668642 | 48601.6 |
| 4-oxalomesaconate hydratase | SAMN05444680_11054 | Not Available | Positive | 4668698 - 4669726 | 38387.9 |
| 4-carboxy-4-hydroxy-2-oxoadipate aldolase | SAMN05444680_11055 | Not Available | Positive | 4669750 - 4670433 | 24107.3 |
| 2-pyrone-4,6-dicarboxylate hydrolase | SAMN05444680_11056 | Not Available | Positive | 4670445 - 4671380 | 34791.5 |
| protocatechuate 4,5-dioxygenase alpha subunit | SAMN05444680_11057 | Not Available | Positive | 4671390 - 4671833 | 16790.9 |
| protocatechuate 4,5-dioxygenase beta subunit | SAMN05444680_11058 | Not Available | Positive | 4671834 - 4672700 | 31535.6 |
| 4-carboxy-2-hydroxymuconate semialdehyde dehydrogenase | SAMN05444680_11059 | Not Available | Positive | 4672702 - 4673661 | 35290.4 |
| predicted oxidoreductase | SAMN05444680_11060 | Not Available | Positive | 4673667 - 4674668 | 36061.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
