Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN05444680_11021 | Not Available | Negative | 4631246 - 4632049 | 27168.3 |
| hypothetical protein | SAMN05444680_11022 | Not Available | Negative | 4632053 - 4632166 | 4044.72 |
| succinate dehydrogenase/fumarate reductase, flavoprotein subunit | SAMN05444680_11023 | Not Available | Negative | 4632310 - 4634082 | 62127.4 |
| shikimate dehydrogenase | SAMN05444680_11024 | Not Available | Negative | 4634084 - 4634884 | 27635.4 |
| predicted dehydrogenase | SAMN05444680_11025 | Not Available | Positive | 4635018 - 4636097 | 38412.7 |
| transcriptional regulator, iclr family | SAMN05444680_11026 | Not Available | Positive | 4636094 - 4636924 | 29611.7 |
| succinate dehydrogenase/fumarate reductase, flavoprotein subunit | SAMN05444680_11027 | Not Available | Positive | 4636939 - 4638774 | 64705.1 |
| nipsnap protein | SAMN05444680_11028 | Not Available | Positive | 4638759 - 4639385 | 22314.8 |
| sugar phosphate isomerase/epimerase | SAMN05444680_11029 | Not Available | Positive | 4639395 - 4640213 | 29468.6 |
| acyl-coa dehydrogenase/acyl-coa dehydrogenase | SAMN05444680_11030 | Not Available | Positive | 4640252 - 4641412 | 42867.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
