Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN05444680_109214 | Not Available | Negative | 4602732 - 4603724 | 34720.3 |
| acetylornithine deacetylase/succinyl-diaminopimelate desuccinylase | SAMN05444680_109215 | Not Available | Negative | 4603775 - 4605187 | 50212.9 |
| transcriptional regulator, lysr family | SAMN05444680_109216 | Not Available | Positive | 4605299 - 4606264 | 34730.6 |
| predicted metal-dependent hydrolase, tim-barrel fold | SAMN05444680_109217 | Not Available | Positive | 4606261 - 4607106 | 30677.5 |
| poly-beta-1,6 n-acetyl-d-glucosamine export porin pgaa | SAMN05444680_109218 | Not Available | Positive | 4607179 - 4609317 | 78141.5 |
| poly-beta-1,6-n-acetyl-d-glucosamine n-deacetylase pgab | SAMN05444680_109219 | Not Available | Positive | 4609314 - 4611119 | 65790.6 |
| biofilm pga synthesis n-glycosyltransferase pgac | SAMN05444680_109220 | Not Available | Positive | 4611148 - 4612401 | 46875.0 |
| pgad-like protein | SAMN05444680_109221 | Not Available | Positive | 4612419 - 4612946 | 18964.1 |
| snoal-like domain-containing protein | SAMN05444680_109222 | Not Available | Negative | 4613026 - 4613631 | 22753.4 |
| galactarate dehydratase | SAMN05444680_109223 | Not Available | Negative | 4613695 - 4614462 | 27175.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
