Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dihydropyrimidinase | SAMN05444680_109204 | Not Available | Positive | 4591867 - 4593300 | 52456.3 |
| arylsulfatase | SAMN05444680_109205 | Not Available | Positive | 4593456 - 4595249 | 66060.4 |
| transcriptional regulator, tetr family | SAMN05444680_109206 | Not Available | Positive | 4595267 - 4595887 | 22559.9 |
| transporter, cpa2 family | SAMN05444680_109207 | Not Available | Positive | 4595943 - 4597199 | 44661.2 |
| nitt/taut family transport system atp-binding protein | SAMN05444680_109208 | Not Available | Negative | 4597169 - 4597918 | 27578.3 |
| nitt/taut family transport system substrate-binding protein | SAMN05444680_109209 | Not Available | Negative | 4597935 - 4598975 | 36288.4 |
| nitt/taut family transport system permease protein | SAMN05444680_109210 | Not Available | Negative | 4599016 - 4599810 | 28011.2 |
| fmn-dependent oxidoreductase, nitrilotriacetate monooxygenase family | SAMN05444680_109211 | Not Available | Negative | 4599800 - 4601212 | 51625.9 |
| membrane protein | SAMN05444680_109212 | Not Available | Negative | 4601294 - 4602133 | 30502.6 |
| bacterioferritin | SAMN05444680_109213 | Not Available | Positive | 4602255 - 4602719 | 17066.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
