Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative spermidine/putrescine transport system permease protein | SAMN05444680_109194 | Not Available | Negative | 4581650 - 4582507 | 30351.4 |
| putative spermidine/putrescine transport system atp-binding protein | SAMN05444680_109195 | Not Available | Negative | 4582511 - 4583602 | 38291.3 |
| putative spermidine/putrescine transport system substrate-binding protein | SAMN05444680_109196 | Not Available | Positive | 4583882 - 4584937 | 37587.5 |
| transcriptional regulator, gntr family | SAMN05444680_109197 | Not Available | Positive | 4585006 - 4585728 | 26528.3 |
| 5-methylthioadenosine/s-adenosylhomocysteine deaminase | SAMN05444680_109198 | Not Available | Positive | 4585831 - 4587186 | 48399.7 |
| abc-type nitrate/sulfonate/bicarbonate transport system, substrate-binding protein | SAMN05444680_109199 | Not Available | Positive | 4587395 - 4588396 | 35752.2 |
| nitt/taut family transport system permease protein | SAMN05444680_109200 | Not Available | Positive | 4588413 - 4589282 | 31072.6 |
| nitt/taut family transport system atp-binding protein | SAMN05444680_109201 | Not Available | Positive | 4589286 - 4590059 | 28600.6 |
| udp-glucuronate 4-epimerase | SAMN05444680_109202 | Not Available | Positive | 4590043 - 4591062 | 36767.1 |
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN05444680_109203 | Not Available | Positive | 4591055 - 4591840 | 27864.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
