Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| maleate isomerase | SAMN05444680_109184 | Not Available | Positive | 4571931 - 4572650 | 26046.2 |
| dihydropyrimidinase | SAMN05444680_109185 | Not Available | Positive | 4572647 - 4574083 | 52276.0 |
| asp/glu/hydantoin racemase | SAMN05444680_109186 | Not Available | Positive | 4574080 - 4574835 | 26373.8 |
| transcriptional regulator, gntr family | SAMN05444680_109187 | Not Available | Positive | 4574892 - 4575602 | 26236.5 |
| aspartyl-trna(asn)/glutamyl-trna(gln) amidotransferase subunit a | SAMN05444680_109188 | Not Available | Negative | 4575612 - 4577069 | 50827.1 |
| allantoin racemase | SAMN05444680_109189 | Not Available | Negative | 4577066 - 4577818 | 25831.5 |
| peptidoglycan/xylan/chitin deacetylase, pgda/cda1 family | SAMN05444680_109190 | Not Available | Negative | 4577815 - 4578747 | 34538.8 |
| guanine deaminase | SAMN05444680_109191 | Not Available | Negative | 4578744 - 4580252 | 54453.7 |
| mafb19-like deaminase | SAMN05444680_109192 | Not Available | Positive | 4580285 - 4580761 | 17435.7 |
| putative spermidine/putrescine transport system permease protein | SAMN05444680_109193 | Not Available | Negative | 4580779 - 4581657 | 30797.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
