Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| predicted arabinose efflux permease, mfs family | SAMN05444680_109174 | Not Available | Negative | 4561440 - 4562606 | 39655.8 |
| l-aspartate oxidase | SAMN05444680_109175 | Not Available | Positive | 4562941 - 4564533 | 56224.9 |
| l-aspartate 1-decarboxylase | SAMN05444680_109176 | Not Available | Positive | 4564566 - 4564967 | 14480.3 |
| ketopantoate hydroxymethyltransferase | SAMN05444680_109177 | Not Available | Positive | 4564973 - 4565845 | 30194.5 |
| pantothenate synthetase | SAMN05444680_109178 | Not Available | Positive | 4565856 - 4566683 | 30559.9 |
| nicotinate-nucleotide pyrophosphorylase | SAMN05444680_109179 | Not Available | Positive | 4566712 - 4567593 | 31270.5 |
| quinolinate synthetase | SAMN05444680_109180 | Not Available | Positive | 4567590 - 4568696 | 39534.4 |
| alpha/beta hydrolase fold | SAMN05444680_109181 | Not Available | Negative | 4568722 - 4569645 | 32557.2 |
| uncharacterized membrane protein yoak, upf0700 family | SAMN05444680_109182 | Not Available | Negative | 4569642 - 4570328 | 24220.1 |
| mfs transporter, acs family, d-galactonate transporter | SAMN05444680_109183 | Not Available | Positive | 4570583 - 4571908 | 46977.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
