Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nitt/taut family transport system atp-binding protein | SAMN05444680_109164 | Not Available | Negative | 4552269 - 4553054 | 28955.9 |
| abc-type nitrate/sulfonate/bicarbonate transport system, permease component | SAMN05444680_109165 | Not Available | Negative | 4553072 - 4553851 | 28893.5 |
| abc-type nitrate/sulfonate/bicarbonate transport system, permease component | SAMN05444680_109166 | Not Available | Negative | 4553848 - 4554684 | 29559.7 |
| nitt/taut family transport system substrate-binding protein | SAMN05444680_109167 | Not Available | Negative | 4554688 - 4555665 | 34121.3 |
| taurine dioxygenase | SAMN05444680_109168 | Not Available | Negative | 4555698 - 4556582 | 33790.2 |
| carboxymethylenebutenolidase | SAMN05444680_109169 | Not Available | Negative | 4556681 - 4557352 | 24236.9 |
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN05444680_109170 | Not Available | Negative | 4557366 - 4558184 | 28246.8 |
| protein of unknown function | SAMN05444680_109171 | Not Available | Positive | 4558418 - 4559026 | 22730.4 |
| adenylate cyclase | SAMN05444680_109172 | Not Available | Negative | 4559065 - 4560747 | 60768.8 |
| putative oxidoreductase | SAMN05444680_109173 | Not Available | Negative | 4560815 - 4561285 | 16206.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
