Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN05444680_109144 | Not Available | Negative | 4532113 - 4533084 | 33892.5 |
| transcriptional regulator, lysr family | SAMN05444680_109145 | Not Available | Positive | 4533241 - 4534170 | 34351.6 |
| na+/h+-dicarboxylate symporter | SAMN05444680_109146 | Not Available | Negative | 4534210 - 4535544 | 47219.3 |
| 3-carboxy-cis,cis-muconate cycloisomerase | SAMN05444680_109147 | Not Available | Negative | 4535625 - 4536971 | 49267.8 |
| citrate lyase subunit beta / citryl-coa lyase | SAMN05444680_109148 | Not Available | Negative | 4537012 - 4537842 | 28947.7 |
| crotonobetainyl-coa:carnitine coa-transferase caib | SAMN05444680_109149 | Not Available | Negative | 4537853 - 4539043 | 42896.3 |
| 3-methylfumaryl-coa hydratase | SAMN05444680_109150 | Not Available | Negative | 4539074 - 4539934 | 32058.3 |
| uncaracterized surface protein containing fasciclin (fas1) repeats | SAMN05444680_109151 | Not Available | Positive | 4540271 - 4540828 | 18712.1 |
| hypothetical protein | SAMN05444680_109152 | Not Available | Positive | 4540870 - 4541157 | 9967.77 |
| apolipoprotein d and lipocalin family protein | SAMN05444680_109153 | Not Available | Positive | 4541227 - 4541814 | 21790.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
