Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-lys | Not Available | Not Available | Positive | 400808 - 400883 | Not Available |
| trna a37 threonylcarbamoyladenosine dehydratase | SAMN05444680_101382 | Not Available | Negative | 400933 - 401733 | 27828.3 |
| tol-pal system protein ybgf | SAMN05444680_101383 | Not Available | Negative | 401759 - 402502 | 27534.6 |
| peptidoglycan-associated lipoprotein | SAMN05444680_101384 | Not Available | Negative | 402502 - 403011 | 18090.4 |
| tolb protein | SAMN05444680_101385 | Not Available | Negative | 403031 - 404215 | 42525.7 |
| atp-binding cassette, subfamily b, msba | SAMN05444680_101386 | Not Available | Positive | 404467 - 406281 | 65564.4 |
| rnase g | SAMN05444680_101387 | Not Available | Negative | 406278 - 407804 | 56278.0 |
| septum formation protein | SAMN05444680_101388 | Not Available | Negative | 407812 - 408417 | 21626.3 |
| 23s rrna (pseudouridine1915-n3)-methyltransferase | SAMN05444680_101389 | Not Available | Negative | 408414 - 408881 | 17263.8 |
| ribosome-associated protein | SAMN05444680_101390 | Not Available | Negative | 408878 - 409537 | 23368.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
