Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function, duf599 | SAMN05444680_109134 | Not Available | Negative | 4524454 - 4525179 | 25587.2 |
| hypothetical protein | SAMN05444680_109135 | Not Available | Negative | 4525189 - 4525626 | 15042.0 |
| hypothetical protein | SAMN05444680_109136 | Not Available | Negative | 4525637 - 4526071 | 14681.4 |
| transcriptional regulator, arsr family | SAMN05444680_109137 | Not Available | Negative | 4526071 - 4526391 | 11672.2 |
| glyoxylase, beta-lactamase superfamily ii | SAMN05444680_109138 | Not Available | Positive | 4526479 - 4527408 | 34024.3 |
| hypothetical protein | SAMN05444680_109139 | Not Available | Positive | 4527432 - 4527947 | 18524.0 |
| cytochrome b561 | SAMN05444680_109140 | Not Available | Positive | 4527953 - 4528525 | 20887.1 |
| hypothetical protein | SAMN05444680_109141 | Not Available | Negative | 4528824 - 4529063 | 9014.0 |
| histidine kinase-, dna gyrase b-, and hsp90-like atpase | SAMN05444680_109142 | Not Available | Positive | 4529206 - 4529898 | 24500.9 |
| hypothetical protein | SAMN05444680_109143 | Not Available | Negative | 4530087 - 4532111 | 70551.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
