Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05444680_109124 | Not Available | Positive | 4517117 - 4517713 | 19766.1 |
| protein of unknown function | SAMN05444680_109125 | Not Available | Positive | 4517710 - 4518516 | 27919.9 |
| hypothetical protein | SAMN05444680_109126 | Not Available | Positive | 4518513 - 4519271 | 26683.0 |
| formylglycine-generating enzyme, required for sulfatase activity, contains sumf1/fge domain | SAMN05444680_109127 | Not Available | Positive | 4519333 - 4520256 | 34219.2 |
| hypothetical protein | SAMN05444680_109128 | Not Available | Positive | 4520253 - 4520744 | 17623.2 |
| hypothetical protein | SAMN05444680_109129 | Not Available | Negative | 4520853 - 4521176 | 11833.2 |
| alpha/beta hydrolase family protein | SAMN05444680_109130 | Not Available | Negative | 4521259 - 4522473 | 43870.2 |
| uncharacterized conserved protein ybcv, duf1398 family | SAMN05444680_109131 | Not Available | Negative | 4522694 - 4523089 | 14612.1 |
| transcriptional regulator, marr family | SAMN05444680_109132 | Not Available | Negative | 4523125 - 4523595 | 17340.1 |
| hypothetical protein | SAMN05444680_109133 | Not Available | Negative | 4524263 - 4524454 | 7164.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
