Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05444680_109114 | Not Available | Negative | 4507844 - 4508284 | 16293.6 |
| type iv pilus assembly protein pile | SAMN05444680_109115 | Not Available | Positive | 4509141 - 4509515 | 13464.1 |
| type iv fimbrial biogenesis protein fimt | SAMN05444680_109116 | Not Available | Positive | 4509506 - 4509994 | 16922.3 |
| type iv pilus assembly protein pilv | SAMN05444680_109117 | Not Available | Positive | 4509994 - 4510611 | 21563.9 |
| type iv pilus assembly protein pilw | SAMN05444680_109118 | Not Available | Positive | 4510608 - 4511708 | 39241.2 |
| pilx n-terminal | SAMN05444680_109119 | Not Available | Positive | 4511705 - 4512271 | 18783.3 |
| sulfatase | SAMN05444680_109120 | Not Available | Positive | 4512342 - 4515005 | 94950.2 |
| hypothetical protein | SAMN05444680_109121 | Not Available | Positive | 4515094 - 4515330 | 8004.91 |
| hypothetical protein | SAMN05444680_109122 | Not Available | Positive | 4515389 - 4516207 | 29220.0 |
| hypothetical protein | SAMN05444680_109123 | Not Available | Positive | 4516257 - 4517105 | 29444.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
