Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding transcriptional regulator, lysr family | SAMN05444680_10984 | Not Available | Negative | 4479038 - 4479937 | 32467.6 |
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN05444680_10985 | Not Available | Positive | 4480049 - 4481023 | 33323.7 |
| fad dependent oxidoreductase | SAMN05444680_10986 | Not Available | Positive | 4481029 - 4482348 | 46107.2 |
| hypothetical protein | SAMN05444680_10987 | Not Available | Positive | 4482668 - 4483309 | 23186.1 |
| alkylhydroperoxidase domain protein, avi_7169 family | SAMN05444680_10988 | Not Available | Negative | 4483333 - 4483935 | 22124.9 |
| cmd domain protein, avi_7170 family | SAMN05444680_10989 | Not Available | Negative | 4483932 - 4484588 | 22951.2 |
| putative fmn-dependent luciferase-like monooxygenase, kpn_01858 family | SAMN05444680_10990 | Not Available | Negative | 4484585 - 4485646 | 37730.8 |
| glyoxalase-like domain-containing protein | SAMN05444680_10991 | Not Available | Negative | 4485651 - 4486478 | 28771.2 |
| amino acid/amide abc transporter atp-binding protein 2, haat family | SAMN05444680_10992 | Not Available | Negative | 4486491 - 4487345 | 30639.3 |
| amino acid/amide abc transporter atp-binding protein 1, haat family | SAMN05444680_10993 | Not Available | Negative | 4487342 - 4488184 | 30205.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
