Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05444680_10974 | Not Available | Positive | 4470719 - 4471612 | 32045.3 |
| hypothetical protein | SAMN05444680_10975 | Not Available | Positive | 4471609 - 4473075 | 45493.8 |
| uncharacterized protein involved in response to no | SAMN05444680_10976 | Not Available | Negative | 4473152 - 4473370 | 8121.09 |
| cupin domain protein | SAMN05444680_10977 | Not Available | Negative | 4473363 - 4473695 | 11740.4 |
| cytochrome c oxidase, cbb3-type, subunit iii | SAMN05444680_10978 | Not Available | Negative | 4473734 - 4474540 | 28707.5 |
| cytochrome c oxidase subunit 1 | SAMN05444680_10979 | Not Available | Negative | 4474540 - 4476162 | 59203.9 |
| cytochrome c oxidase subunit 2 | SAMN05444680_10980 | Not Available | Negative | 4476149 - 4476718 | 20701.1 |
| hypothetical protein | SAMN05444680_10981 | Not Available | Negative | 4476715 - 4476879 | 5996.25 |
| cytochrome c, mono-and diheme variants | SAMN05444680_10982 | Not Available | Negative | 4476891 - 4478183 | 46804.9 |
| cytochrome c553 | SAMN05444680_10983 | Not Available | Negative | 4478188 - 4478931 | 26216.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
