Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cyclopropane-fatty-acyl-phospholipid synthase | SAMN05444680_10954 | Not Available | Negative | 4452368 - 4453393 | 39483.9 |
| hsp20 family protein | SAMN05444680_10955 | Not Available | Positive | 4453570 - 4454004 | 15954.0 |
| molecular chaperone ibpa, hsp20 family | SAMN05444680_10956 | Not Available | Positive | 4454017 - 4454421 | 14661.2 |
| hippurate hydrolase | SAMN05444680_10957 | Not Available | Negative | 4454450 - 4455634 | 41861.3 |
| peptide/nickel transport system substrate-binding protein | SAMN05444680_10958 | Not Available | Positive | 4455747 - 4457351 | 58870.5 |
| peptide/nickel transport system permease protein | SAMN05444680_10959 | Not Available | Positive | 4457361 - 4458338 | 35342.0 |
| peptide/nickel transport system permease protein | SAMN05444680_10960 | Not Available | Positive | 4458335 - 4459138 | 28241.1 |
| peptide/nickel transport system atp-binding protein | SAMN05444680_10961 | Not Available | Positive | 4459135 - 4460151 | 36113.2 |
| peptide/nickel transport system atp-binding protein/oligopeptide transport system atp-binding protein/glutathione transport system atp-binding protein | SAMN05444680_10962 | Not Available | Positive | 4460148 - 4460981 | 30072.4 |
| adenine/guanine phosphoribosyltransferase | SAMN05444680_10963 | Not Available | Positive | 4460989 - 4461684 | 25307.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
