Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05444680_10944 | Not Available | Positive | 4443177 - 4444997 | 64704.4 |
| cyclopropane-fatty-acyl-phospholipid synthase | SAMN05444680_10945 | Not Available | Negative | 4445014 - 4446282 | 47634.0 |
| hypothetical protein | SAMN05444680_10946 | Not Available | Negative | 4446279 - 4447067 | 29296.7 |
| hypothetical protein | SAMN05444680_10947 | Not Available | Negative | 4447064 - 4448449 | 50874.0 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05444680_10948 | Not Available | Positive | 4448656 - 4449219 | 21450.6 |
| anti-ecfsigma factor, chrr | SAMN05444680_10949 | Not Available | Positive | 4449216 - 4449869 | 23038.9 |
| uncharacterized membrane protein | SAMN05444680_10950 | Not Available | Negative | 4449876 - 4450340 | 16716.7 |
| hypothetical protein | SAMN05444680_10951 | Not Available | Negative | 4450337 - 4450978 | 23419.7 |
| steroid 5-alpha reductase family enzyme | SAMN05444680_10952 | Not Available | Negative | 4450978 - 4451778 | 29237.2 |
| protein of unknown function | SAMN05444680_10953 | Not Available | Negative | 4451775 - 4452371 | 21376.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
