Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| n-acetylglutamate synthase | SAMN05444680_101371 | Not Available | Positive | 390304 - 391650 | 49315.4 |
| hypothetical protein | SAMN05444680_101372 | Not Available | Positive | 391686 - 392132 | 15999.1 |
| succinyldiaminopimelate aminotransferase apoenzyme | SAMN05444680_101373 | Not Available | Positive | 392129 - 393340 | 43812.2 |
| 2,3,4,5-tetrahydropyridine-2-carboxylate n-succinyltransferase | SAMN05444680_101374 | Not Available | Positive | 393337 - 394161 | 29355.1 |
| twitching motility protein pilu | SAMN05444680_101375 | Not Available | Positive | 394237 - 395385 | 42199.8 |
| succinyldiaminopimelate desuccinylase | SAMN05444680_101376 | Not Available | Positive | 395402 - 396577 | 41972.8 |
| [lsu ribosomal protein l3p]-glutamine n5-methyltransferase | SAMN05444680_101377 | Not Available | Positive | 396574 - 397437 | 30939.8 |
| atp-binding cassette, subfamily f, member 3 | SAMN05444680_101378 | Not Available | Positive | 397458 - 399455 | 73234.4 |
| hypothetical protein | SAMN05444680_101379 | Not Available | Positive | 399476 - 400054 | 20637.5 |
| hypothetical protein | SAMN05444680_101380 | Not Available | Positive | 400188 - 400418 | 8561.96 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
