Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| branched-chain amino acid transport system substrate-binding protein | SAMN05444680_10934 | Not Available | Positive | 4435792 - 4435911 | 4142.04 |
| protein of unknown function | SAMN05444680_10935 | Not Available | Negative | 4436130 - 4436735 | 22033.0 |
| hypothetical protein | SAMN05444680_10936 | Not Available | Positive | 4437284 - 4437646 | 13229.0 |
| hypothetical protein | SAMN05444680_10937 | Not Available | Positive | 4437771 - 4437959 | 6094.26 |
| protein of unknown function | SAMN05444680_10938 | Not Available | Positive | 4438279 - 4438599 | 10908.1 |
| uncharacterized conserved protein ytfp, gamma-glutamylcyclotransferase (ggct)/aig2-like family | SAMN05444680_10939 | Not Available | Negative | 4438835 - 4439722 | 32634.5 |
| dna-binding protein h-ns | SAMN05444680_10940 | Not Available | Negative | 4439804 - 4440307 | 18369.0 |
| threonine dehydratase | SAMN05444680_10941 | Not Available | Negative | 4440674 - 4441642 | 34401.1 |
| hypothetical protein | SAMN05444680_10942 | Not Available | Negative | 4441821 - 4442162 | 12387.3 |
| predicted dithiol-disulfide isomerase, dsba family | SAMN05444680_10943 | Not Available | Negative | 4442303 - 4442968 | 23684.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
