Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| two-component system, ompr family, copper resistance phosphate regulon response regulator cusr | SAMN05444680_10924 | Not Available | Negative | 4424580 - 4425266 | 25607.1 |
| hydrophobic/amphiphilic exporter-1, hae1 family | SAMN05444680_10925 | Not Available | Negative | 4425263 - 4428427 | 113374.0 |
| membrane fusion protein, multidrug efflux system | SAMN05444680_10926 | Not Available | Negative | 4428424 - 4429641 | 43063.3 |
| efflux transporter, outer membrane factor (omf) lipoprotein, nodt family | SAMN05444680_10927 | Not Available | Negative | 4429638 - 4431104 | 51103.8 |
| protein of unknown function | SAMN05444680_10928 | Not Available | Negative | 4431401 - 4431766 | 12706.8 |
| hypothetical protein | SAMN05444680_10929 | Not Available | Positive | 4432051 - 4432317 | 9671.12 |
| hypothetical protein | SAMN05444680_10930 | Not Available | Positive | 4432415 - 4433278 | 28776.2 |
| cupin domain-containing protein | SAMN05444680_10931 | Not Available | Negative | 4433508 - 4433942 | 15206.0 |
| cytochrome c | SAMN05444680_10932 | Not Available | Positive | 4433974 - 4434423 | 16281.5 |
| amino acid/amide abc transporter substrate-binding protein, haat family | SAMN05444680_10933 | Not Available | Positive | 4434629 - 4435783 | 40777.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
