Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized membrane-anchored protein | SAMN05444680_10914 | Not Available | Positive | 4415594 - 4416877 | 47745.3 |
| protein-s-isoprenylcysteine o-methyltransferase ste14 | SAMN05444680_10915 | Not Available | Negative | 4416888 - 4417460 | 21605.9 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05444680_10916 | Not Available | Positive | 4417629 - 4418234 | 22757.2 |
| putative zinc-finger | SAMN05444680_10917 | Not Available | Positive | 4418231 - 4418896 | 23665.1 |
| subtilase family protein | SAMN05444680_10918 | Not Available | Positive | 4418893 - 4420161 | 43899.5 |
| conserved hypothetical protein | SAMN05444680_10919 | Not Available | Positive | 4420163 - 4420855 | 24510.0 |
| tigr03118 family protein | SAMN05444680_10920 | Not Available | Positive | 4420922 - 4422079 | 38635.7 |
| tetratricopeptide repeat-containing protein | SAMN05444680_10921 | Not Available | Positive | 4422114 - 4422641 | 18137.5 |
| polyketide cyclase / dehydrase and lipid transport | SAMN05444680_10922 | Not Available | Positive | 4422641 - 4423207 | 20938.4 |
| two-component system, ompr family, heavy metal sensor histidine kinase cuss | SAMN05444680_10923 | Not Available | Negative | 4423213 - 4424583 | 49796.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
