Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05444680_1094 | Not Available | Positive | 4404819 - 4405184 | 13419.2 |
| arac-type dna-binding protein | SAMN05444680_1095 | Not Available | Negative | 4405187 - 4406215 | 37947.8 |
| glutathione s-transferase | SAMN05444680_1096 | Not Available | Negative | 4406225 - 4406857 | 23067.8 |
| gst-like protein | SAMN05444680_1097 | Not Available | Negative | 4406854 - 4407720 | 32124.0 |
| hypothetical protein | SAMN05444680_1098 | Not Available | Negative | 4407789 - 4408250 | 16079.5 |
| catechol 1,2-dioxygenase | SAMN05444680_1099 | Not Available | Negative | 4408290 - 4409234 | 34235.4 |
| hypothetical protein | SAMN05444680_10910 | Not Available | Positive | 4409402 - 4409890 | 16474.6 |
| serine phosphatase rsbu, regulator of sigma subunit | SAMN05444680_10911 | Not Available | Positive | 4409976 - 4411679 | 61798.1 |
| pas domain s-box-containing protein | SAMN05444680_10912 | Not Available | Positive | 4411676 - 4414153 | 91004.0 |
| outer membrane protein (porin) | SAMN05444680_10913 | Not Available | Negative | 4414161 - 4415453 | 45176.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
