Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phnb protein | SAMN05444680_108192 | Not Available | Positive | 4397241 - 4397663 | 15174.5 |
| quinol monooxygenase ygin | SAMN05444680_108193 | Not Available | Positive | 4397755 - 4398063 | 10886.1 |
| glyceraldehyde-3-phosphate dehydrogenase (nad+) | SAMN05444680_108194 | Not Available | Negative | 4398210 - 4399211 | 36250.5 |
| transketolase | SAMN05444680_108195 | Not Available | Negative | 4399257 - 4401296 | 73172.1 |
| s-adenosylmethionine decarboxylase | SAMN05444680_108196 | Not Available | Positive | 4401398 - 4401787 | 13633.1 |
| murnac alpha-1-phosphate uridylyltransferase | SAMN05444680_108197 | Not Available | Positive | 4401784 - 4402491 | 25046.3 |
| hypothetical protein | SAMN05444680_108198 | Not Available | Negative | 4402551 - 4403233 | 23930.8 |
| hypothetical protein | SAMN05444680_1091 | Not Available | Positive | 4403234 - 4403348 | 3882.46 |
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN05444680_1092 | Not Available | Positive | 4403353 - 4404345 | 34898.4 |
| hypothetical protein | SAMN05444680_1093 | Not Available | Positive | 4404364 - 4404822 | 16966.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
