Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fkbp-type peptidyl-prolyl cis-trans isomerase slyd | SAMN05444680_108172 | Not Available | Positive | 4374159 - 4374638 | 17429.7 |
| hypothetical protein | SAMN05444680_108173 | Not Available | Negative | 4374642 - 4374905 | 9470.2 |
| hypothetical protein | SAMN05444680_108174 | Not Available | Positive | 4375138 - 4376208 | 38597.4 |
| dna-binding transcriptional regulator, lysr family | SAMN05444680_108175 | Not Available | Negative | 4376215 - 4377120 | 33118.6 |
| solute carrier family 10 (sodium/bile acid cotransporter), member 7 | SAMN05444680_108176 | Not Available | Positive | 4377191 - 4378192 | 35318.8 |
| predicted oxidoreductase | SAMN05444680_108177 | Not Available | Negative | 4378197 - 4379207 | 37066.2 |
| atp dependent helicase, lhr family | SAMN05444680_108178 | Not Available | Negative | 4379296 - 4383633 | 157445.0 |
| acrylyl-coa reductase (nadph) | SAMN05444680_108179 | Not Available | Negative | 4383697 - 4384686 | 34177.4 |
| putative flavoprotein involved in k+ transport | SAMN05444680_108180 | Not Available | Positive | 4384835 - 4386637 | 66747.3 |
| fha domain-containing protein | SAMN05444680_108181 | Not Available | Negative | 4386638 - 4386985 | 12814.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
