Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05444680_108162 | Not Available | Positive | 4357953 - 4358282 | 12287.4 |
| transcriptional regulator, tetr family | SAMN05444680_108163 | Not Available | Negative | 4358279 - 4359013 | 26615.5 |
| biphenyl-2,3-diol 1,2-dioxygenase | SAMN05444680_108164 | Not Available | Positive | 4359069 - 4360025 | 35096.1 |
| cytochrome c oxidase, cbb3-type, subunit iii | SAMN05444680_108165 | Not Available | Positive | 4360022 - 4360933 | 32072.7 |
| hypothetical protein | SAMN05444680_108166 | Not Available | Positive | 4360995 - 4361186 | 7230.66 |
| hypothetical protein | SAMN05444680_108167 | Not Available | Negative | 4361197 - 4361508 | 10834.5 |
| lysophospholipase l1 | SAMN05444680_108168 | Not Available | Positive | 4361697 - 4362467 | 27786.3 |
| dna excision repair protein ercc-2 | SAMN05444680_108169 | Not Available | Negative | 4362408 - 4364762 | 86870.4 |
| nramp (natural resistance-associated macrophage protein) metal ion transporters | SAMN05444680_108170 | Not Available | Negative | 4364821 - 4366116 | 45553.1 |
| autotransporter-associated beta strand repeat-containing protein | SAMN05444680_108171 | Not Available | Negative | 4366470 - 4373720 | 229202.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
