Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05444680_108152 | Not Available | Negative | 4347540 - 4348160 | 23006.2 |
| dna topoisomerase-3 | SAMN05444680_108153 | Not Available | Positive | 4348246 - 4351161 | 107815.0 |
| hypothetical protein | SAMN05444680_108154 | Not Available | Positive | 4351179 - 4351346 | 5255.23 |
| putative glutamine amidotransferase | SAMN05444680_108155 | Not Available | Negative | 4351357 - 4352238 | 32624.9 |
| sugar phosphate isomerase/epimerase | SAMN05444680_108156 | Not Available | Positive | 4352403 - 4353458 | 39163.0 |
| serine protease, s1-c subfamily, contains c-terminal pdz domain | SAMN05444680_108157 | Not Available | Negative | 4353469 - 4354551 | 38180.1 |
| permease of the drug/metabolite transporter (dmt) superfamily | SAMN05444680_108158 | Not Available | Negative | 4354636 - 4355598 | 34760.3 |
| bacterial translation initiation factor 1 (bif-1) | SAMN05444680_108159 | Not Available | Positive | 4355975 - 4356244 | 10080.2 |
| atp-dependent rna helicase dbpa | SAMN05444680_108160 | Not Available | Positive | 4356252 - 4357649 | 50416.9 |
| hypothetical protein | SAMN05444680_108161 | Not Available | Positive | 4357686 - 4357856 | 5940.32 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
