Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05444680_101361 | Not Available | Negative | 378868 - 379302 | 15829.8 |
| dna polymerase iii, chi subunit | SAMN05444680_101362 | Not Available | Negative | 379302 - 379739 | 16069.0 |
| aminopeptidase a. metallo peptidase. merops family m17 | SAMN05444680_101363 | Not Available | Negative | 379736 - 381259 | 51888.4 |
| lipopolysaccharide export system permease protein | SAMN05444680_101364 | Not Available | Positive | 381281 - 382390 | 41197.4 |
| lipopolysaccharide export system permease protein | SAMN05444680_101365 | Not Available | Positive | 382387 - 383493 | 41237.6 |
| sirohydrochlorin cobaltochelatase | SAMN05444680_101366 | Not Available | Positive | 383505 - 383873 | 13442.4 |
| lysr family transcriptional regulator, cys regulon transcriptional activator | SAMN05444680_101367 | Not Available | Positive | 383937 - 384878 | 35027.4 |
| methionine aminotransferase | SAMN05444680_101368 | Not Available | Positive | 384890 - 386047 | 42077.6 |
| protein of unknown function | SAMN05444680_101369 | Not Available | Positive | 386158 - 386316 | 5479.24 |
| atp-dependent helicase hrpa | SAMN05444680_101370 | Not Available | Negative | 386389 - 390168 | 141031.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
