Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type iv pilus assembly protein pilv | SAMN05444680_108121 | Not Available | Positive | 4315391 - 4315834 | 15548.8 |
| type iv pilus assembly protein pilw | SAMN05444680_108122 | Not Available | Positive | 4315840 - 4316982 | 40467.0 |
| tfp pilus assembly protein pilx | SAMN05444680_108123 | Not Available | Positive | 4316992 - 4317687 | 24188.2 |
| type iv pilus assembly protein pily1 | SAMN05444680_108124 | Not Available | Positive | 4317733 - 4321731 | 140531.0 |
| tonb family c-terminal domain-containing protein | SAMN05444680_108125 | Not Available | Positive | 4321739 - 4322482 | 26443.4 |
| hypothetical protein | SAMN05444680_108126 | Not Available | Negative | 4322527 - 4322871 | 12527.2 |
| type iv pilus assembly protein pila | SAMN05444680_108128 | Not Available | Negative | 4323336 - 4323845 | 17032.4 |
| ribonuclease bn, trna processing enzyme | SAMN05444680_108129 | Not Available | Negative | 4324052 - 4324858 | 29137.1 |
| adenylate cyclase | SAMN05444680_108130 | Not Available | Negative | 4324893 - 4327136 | 80371.3 |
| fha domain-containing protein | SAMN05444680_108131 | Not Available | Negative | 4327176 - 4327832 | 22340.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
