Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized conserved protein yaeq, suppresses rfah defect | SAMN05444680_108110 | Not Available | Positive | 4308329 - 4308889 | 20515.6 |
| hypothetical protein | SAMN05444680_108111 | Not Available | Negative | 4309020 - 4309325 | 11403.8 |
| hypothetical protein | SAMN05444680_108112 | Not Available | Negative | 4309330 - 4309800 | 17758.6 |
| integral membrane protein, yjbe family | SAMN05444680_108114 | Not Available | Positive | 4310213 - 4310950 | 25913.7 |
| hypothetical protein | SAMN05444680_108115 | Not Available | Positive | 4311007 - 4311471 | 16985.8 |
| putative membrane protein | SAMN05444680_108116 | Not Available | Positive | 4311488 - 4311841 | 12502.0 |
| putative zn-dependent protease, contains tpr repeats | SAMN05444680_108117 | Not Available | Negative | 4311848 - 4313287 | 52111.2 |
| cyclic pyranopterin monophosphate synthase subunit moac | SAMN05444680_108118 | Not Available | Positive | 4313486 - 4313968 | 16700.4 |
| type iv pilus assembly protein pile | SAMN05444680_108119 | Not Available | Positive | 4314341 - 4314769 | 15416.9 |
| type iv fimbrial biogenesis protein fimt | SAMN05444680_108120 | Not Available | Positive | 4314789 - 4315376 | 20328.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
